Insertion junction: CLIP2.036956_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036956
Chromosome:chromosome 2
Location:6167534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGACAGGAGCCGTGGGAAACCGCGTTGCGTGCGGGGTTTGGGTTACG
Internal bar code:CAGTTGCCAGCTTGAAAGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCCTTCTAACGCTTTCT
Suggested primer 2:AACCAAACCCGATGCAAACG