Insertion junction: CLIP2.036962_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036962
Chromosome:chromosome 7
Location:1034371
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g319650 FXL4,FXL5 FixL-like PAS domain protein; (1 of 3) IPR000014//IPR013767 - PAS domain // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGCTGCAGGCTGGTTCACTCATAGGGGCTGCGAGGAGGGAGAACAG
Internal bar code:ATCAAACTCAGCCATTACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTATCGAGGCGAGTAAA
Suggested primer 2:TTTTGTACGGCTTGGCGTTG