Insertion junction: CLIP2.036962_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036962
Chromosome:chromosome 11
Location:2557562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095095 PHC12 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 12 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGTTACGGCATGTGTTTGGCCTGGGACGCAGCCCCTGCACAACTCTC
Internal bar code:AGCTGTATCTAGTGTTAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCTCCCCTCCTCCTC
Suggested primer 2:AGCAGTACTGGTTCATGCCC