Insertion junction: CLIP2.036976_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036976
Chromosome:chromosome 16
Location:630616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691900 PUS19 RNA pseudouridine synthase; (1 of 1) PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCATTGGACTCGGTCAATTACCCCCAATCCATTCTCCACATAAGCG
Internal bar code:ATGGACGGAGATCTAAAGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCGACAGAGTGTTTTG
Suggested primer 2:AGGCAGGACAGAACGAATGG