Insertion junction: CLIP2.036995_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036995
Chromosome:chromosome 3
Location:3851472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170300 SUB5 (1 of 1) 3.4.24.30 - Coccolysin / Streptococcus thermophilus intracellular proteinase; Subtilisin-like protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGCCCGCGCCCGTCCAGACCACGAGACCAGAACACGTGCGCGCCCA
Internal bar code:CTAATTGTTATAATACCGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3215
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGAACGGCTTTGCGAC
Suggested primer 2:ACCACCAGACATTCACGGTC