Insertion junction: CLIP2.036998_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036998
Chromosome:chromosome 12
Location:9554973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540050 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACGCACGTCCACCACCCCACCACACCCACCACCCATCAACCCCGCC
Internal bar code:ATAGCATTTAGTGATATTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:94
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGAGTGCCAGAAGGACG
Suggested primer 2:CGTTGTGGCAACCTTCGAAG