Insertion junction: CLIP2.037014_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037014
Chromosome:chromosome 13
Location:3343322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586400 (1 of 1) 1.14.11.23//1.14.11.9 - Flavonol synthase / FLS // Flavanone 3-dioxygenase / Naringenin,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGTGCACCCGGTAATTTGGTTGATTTTTGTCATGACTCACGCGTGCAA
Internal bar code:TGTTGTTAGCTGTACTACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2345
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAACACTGTGGAGGACA
Suggested primer 2:CTCTCCTCCCACTCTCACCA