Insertion junction: CLIP2.037015_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037015
Chromosome:chromosome 17
Location:5604802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739850 LRRC6,Seahorse,DNAAF11,MOT47 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Leucine-rich repeat-containing protein 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCCGACCCGCCCCACAGCTCCCTCCACCCCCACAACCCACACATGC
Internal bar code:TTGGGTCATGAGTGTAATCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGGAAAGGGGAAGGGG
Suggested primer 2:TGCTCCCTGTGCTCTAGGAT