Insertion junction: CLIP2.037032_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037032
Chromosome:chromosome 12
Location:5831718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533201 (1 of 3) PF07452 - CHRD domain (CHRD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGGGCGGCTGCACGTGCCGCGCTCAGTTGAAGCGGCAGGGGCTCTTG
Internal bar code:AATATACTAACCCTCCTGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGCGTGTGTAC
Suggested primer 2:TGATGAGATGTGTTGGGGGC