Insertion junction: CLIP2.037036_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037036
Chromosome:chromosome 2
Location:1262420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082000 AGE1 DNA repair glycosylase; (1 of 1) K03575 - A/G-specific adenine glycosylase (mutY) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAAGACCGGCGGCTCACCGCAGCAGGTATGCGAGGTAACTTCAGGTA
Internal bar code:AGGCTAAGCAAGGTTGGCTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1953
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCGTTTCATTTCTTCGC
Suggested primer 2:AGACGTAGCCTCCGTTTGTG