Insertion junction: CLIP2.037040_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037040
Chromosome:chromosome 10
Location:1962632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432000 DDB1 (1 of 1) K10610 - DNA damage-binding protein 1 (DDB1); UV-damaged DNA binding complex subunit 1 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGACGTGGCTGATATCTGTAAGACATAACGGTGTGTCAGGACTGGTC
Internal bar code:TTATTTGCATGACGTCAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTGCGCTTCCCCTCGAA
Suggested primer 2:TGCAGGCACACATCCTCAAT