Insertion junction: CLIP2.037068_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037068
Chromosome:chromosome 2
Location:4491391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800228 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCTTGCGCCACCTGTGTGGGATGTGGTGTGTCTCGCTGCTATGTCT
Internal bar code:AGTCAGATCAGATGAGAACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5072
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAAATGGCCGCTTTGA
Suggested primer 2:TTGGTGAAGCGTGTGTGACT