Insertion junction: CLIP2.037081_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037081
Chromosome:chromosome 16
Location:1157060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650250 HFO39,HFO25 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCACTTACACAGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGAC
Internal bar code:GTCTTAGATCTTAATTCGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGTGATTGCCCAAGGA
Suggested primer 2:GTTTGCTGCGGTTCTTGTGT