Insertion junction: CLIP2.037082_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037082
Chromosome:chromosome 6
Location:46680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g248950 (1 of 3) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCACTGTCTCGTCGTCGTCGCTACCGATGGCGGTACCGCTGCCACCA
Internal bar code:TTAATAATTAGGACAGTCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:6127
LEAP-Seq percent confirming:99.4048
LEAP-Seq n confirming:167
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:168

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACCGTCGGTTCGCTTA
Suggested primer 2:GAGGTATCACGTGCCCTAGC