Insertion junction: CLIP2.037107_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037107
Chromosome:chromosome 12
Location:5965379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCAGACGGCAGCGGACAAGTGTTCCCCGGTCACGGGAAAAGGGGGAG
Internal bar code:GATTAGGTACCACATTTGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2571
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAACCACTCAACCTGCA
Suggested primer 2:CGCATACCAGGAACGTGACT