Insertion junction: CLIP2.037107_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037107
Chromosome:chromosome 12
Location:5965387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTGCCCGTTCCGCAACTGATCCAGGATCCAGCGCAGGGCGCCGAAAC
Internal bar code:CTTATCCTGCTAGAGTTAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATACCAGGAACGTGACT
Suggested primer 2:ACACAACCACTCAACCTGCA