Insertion junction: CLIP2.037112_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037112
Chromosome:chromosome 6
Location:2875399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTTCCAGGGCCTGCTCCCAGACGAGGATGCTGAGGTGCGTGGCGCAG
Internal bar code:ATGTTAGACGGGCGTTGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5208
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:133
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTATGTGCGCCTTCATTG
Suggested primer 2:GTGCTAGGCCCGTAGTCATC