Insertion junction: CLIP2.037113_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037113
Chromosome:chromosome 4
Location:3752190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229450 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCATGAGCTGGGTGCACGGTTCCAGGCTAGGCAGCAGCAGCTGTTTT
Internal bar code:TGCCGGTGCTGGAGATTTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3271
LEAP-Seq percent confirming:37.037
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTGTATGTTGGCCTGCT
Suggested primer 2:GATGTAATGCTGCAGCTGCC