Insertion junction: CLIP2.037114_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037114
Chromosome:chromosome 16
Location:7020330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673729 CPN11 Chaperonin 11, chloroplastic; (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAGCGCTCACGACTACCGTGCATGGGCCTACGTACTTCACTGCTCC
Internal bar code:AAGGGGTTCCGAGCGAACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4469
LEAP-Seq percent confirming:91.8605
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCACCTAGTTTGGGTCG
Suggested primer 2:CAGCAATATCCGCCAGCAAC