Insertion junction: CLIP2.037116_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037116
Chromosome:chromosome 5
Location:363617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGAGAGCCCCCATCGGTATTTGAAGGCACAGCGTGCTTCTTCGAACG
Internal bar code:ATGCAGAGTCCGAATTCATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:17.8571
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTGAAAACCGCACGACG
Suggested primer 2:GGACAAGCTTTTGGCAGGTG