Insertion junction: CLIP2.037122_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037122
Chromosome:chromosome 6
Location:1453569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260150 SMM17,FAP393 Flagellar Associated Protein 393; (1 of 1) PTHR12176//PTHR12176:SF16 - UNCHARACTERIZED // PROTEIN C17E4.11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGCAATTGTGCAATCGCAGCGCAAGTCAGCACTTCGTCGTCGCCTT
Internal bar code:TTGCCATACCTTGCAGAAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGCCCTTGTACTTGCCC
Suggested primer 2:GGACCCTCCACATCAATGCA