Insertion junction: CLIP2.037124_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037124
Chromosome:chromosome 14
Location:2458160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623850 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGCACGTCCGAGCCAAGCCTGTTATCGCTGCTTGCTATCGCGCCCT
Internal bar code:AGGGTGGGCAGTTGGGGCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1629
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCGGAAGACCAAGGAGG
Suggested primer 2:CGGGAGTGACCACAACGTAA