Insertion junction: CLIP2.037126_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037126
Chromosome:chromosome 7
Location:3876859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339100 (1 of 4) PTHR24361//PTHR24361:SF411 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCCGCCGCCGGCGTTGTAGGGGTTGCGCCCAGGCCCGGCGCCGCCA
Internal bar code:TTGAAGATGTATTTGGTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:29.2308
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCCGCTTAATCCCGCC
Suggested primer 2:CCGCTCGTTTTCGTTGGTTT