Insertion junction: CLIP2.037133_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037133
Chromosome:chromosome 12
Location:7575706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556000 ECP88 88 kDa extracellular polypeptide; (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTTTGCCTGACTCACAGCCTGCCTGAGTCACCTGCGTCCTAGTCGT
Internal bar code:GTGTTCGTCTAGGGCGAGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4247
LEAP-Seq percent confirming:67.3077
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTCCCTTACGCACCTT
Suggested primer 2:TGCAGCTCAGTGTGTAAGGG