Insertion junction: CLIP2.037133_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037133
Chromosome:chromosome 12
Location:7575706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556000 ECP88 88 kDa extracellular polypeptide; (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATAACATGTGCTATTTAGACGTTCGGGCACAGCGGAAATTCGGTAGT
Internal bar code:ATTTTTCCATTCTTGGGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTCAGTGTGTAAGGG
Suggested primer 2:CGTCTTCCCTTACGCACCTT