Insertion junction: CLIP2.037143_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037143
Chromosome:chromosome 17
Location:5388264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738450 (1 of 5) 2.7.11.7 - [Myosin heavy-chain] kinase / Myosin II heavy-chain kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAAGTCACCAACGTCATTCGTTGACAGTCGAACTGCGGCAGGCGGAG
Internal bar code:TCAATGCGACCTAGCGTGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3292
LEAP-Seq percent confirming:89.4118
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTACCGTAGTAAGGGCCG
Suggested primer 2:GAGACGATCAGGCGAGACTG