Insertion junction: CLIP2.037144_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037144
Chromosome:chromosome 3
Location:5501380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184750 (1 of 1) PF08524 - rRNA processing (rRNA_processing) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTCTCCCGCACCCGCTCCATTACCCTTGTTCCCCGTGCGTTCTATC
Internal bar code:GATTTGACCACAGCATCATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCTGCATTGTTGGAAGC
Suggested primer 2:CTGAATGCTGGGGTAGGCAA