Insertion junction: CLIP2.037147_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037147
Chromosome:chromosome 6
Location:3865786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATCACGGCAAGCGCAAAACCATGCCGTCACCAACAGCCCGAGAGATG
Internal bar code:CAGTATTCTTTACGTTATCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:36.8421
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCCGGACCGAGATAGTT
Suggested primer 2:CCGTTGCATTACGCTAGTGC