Insertion junction: CLIP2.037154_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037154
Chromosome:chromosome 12
Location:5902639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533600 DESI6,DeSI-6 (1 of 6) PF05903 - PPPDE putative peptidase domain (Peptidase_C97); DeSI-type SUMO protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGCGGGCCCTCAGACTCCCGCCCACCCACGCGTCTGCGTCCCTAGG
Internal bar code:GAAGCGTTTTTTCGTAATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTGTGGCCCTGAATGGA
Suggested primer 2:GCGAATCGTTACAACTCGCC