Insertion junction: CLIP2.037156_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037156
Chromosome:chromosome 13
Location:5167001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCCTCATGCCGCCTCACCCCGCCACCGGCCACGTGATGCCACCAC
Internal bar code:AATATTGACTTCGGCTTTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCACTCACAGCTGCAAG
Suggested primer 2:GGACACATGCGTTGTTAGGC