Insertion junction: CLIP2.037156_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037156
Chromosome:chromosome 13
Location:5167002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCGGCCGAGGGTTGCAAGGGGGCTGGAACGTGTGTAGGAGCGGGGG
Internal bar code:AATATTGACTTCGGCTTTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACATGCGTTGTTAGGC
Suggested primer 2:TACCCACTCACAGCTGCAAG