Insertion junction: CLIP2.037168_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037168
Chromosome:chromosome 11
Location:1895402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTCCGGCTGGTGGCAGCGTAACAGTTCCTCATCGGTGGCCTGCGAG
Internal bar code:TGTGACAGGAGGGACTTCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2491
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGAAGTGGTGTGGGAG
Suggested primer 2:ATGTGCTTCAGTGCGCTAGT