Insertion junction: CLIP2.037205_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037205
Chromosome:chromosome 7
Location:4374696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340950 AXL4 (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN; Arabinose chain extension enzyme like protein 4 3'UTR
Cre07.g341000 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGCTGAGGGTGAGGGGGGCGGGCGGGCAGGTGGAGGGGGGTTGTAG
Internal bar code:ATTAATCTATCAATTTGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATCAGCATCCGCAGTG
Suggested primer 2:GGATGCAGGGTGTGGATGAA