Insertion junction: CLIP2.037210_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037210
Chromosome:chromosome 9
Location:5804455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411300 3'UTR
Cre09.g411350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTGGGTGCGAAGGAGAGGCTGGAGAGCGACGGTCGCTCTGAAGTGTC
Internal bar code:GATGGGGATGCACAGCATTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTAGCTGCACGTACAGT
Suggested primer 2:TGCGTTCACTCGTAGGACAC