Insertion junction: CLIP2.037211_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037211
Chromosome:chromosome 12
Location:5743890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801436 (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTCTGTGCCCTCAGCCAGCCTTACCCTTTCACCCCGTGCCCCACAG
Internal bar code:ATCGATTCGGTCTCGAAAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:77.1429
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCCGAAGTTGTCAAAGC
Suggested primer 2:GTGTTGTGTTGGTGACGTCG