Insertion junction: CLIP2.037221_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037221
Chromosome:chromosome 6
Location:3682316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278151 (1 of 1) K10880 - DNA-repair protein XRCC3 (XRCC3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGAGCCTCCTCACCGTTCAGCTGCCAGAAGAGGAGGGCGGGCTCGC
Internal bar code:CAGATTGGGTAAAGTGCGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACACGGTTTGGGGTTGA
Suggested primer 2:GGCCCCTCGATTCTAACTCG