Insertion junction: CLIP2.037224_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037224
Chromosome:chromosome 1
Location:5786414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041450 PPP4 (1 of 1) K17505 - protein phosphatase 1K [EC:3.1.3.16] (PPM1K, PP2CM); Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTAGTTGCAAGCCGCAGGGTGGCGGTTTGGAGCTAGGAGTTCTGTGC
Internal bar code:ATTGCTCTTTGATACCTACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTTCTATCTCCCCCTCA
Suggested primer 2:GTCGGAGGGAGAATTAGCGG