Insertion junction: CLIP2.037232_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037232
Chromosome:chromosome 2
Location:4141903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800224 CDS
lncRNA_TCONS_00041505 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATGGACCCCAGCCAAGCAGCCCGCTTCACGCACCTCAATCCGCAGG
Internal bar code:TATAACGGGGGATGACCCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2850
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGGGGCTATGGGTTGTG
Suggested primer 2:ACCCTGGGGCATCTAGATGT