Insertion junction: CLIP2.037235_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037235
Chromosome:chromosome 7
Location:4877659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346350 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCCGGTCAAAGCCCGGGGCCGGCTGGCCGCCATGGAGCGATGGCTGG
Internal bar code:AGGCTTGTCACAAATAGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACATGCATGCA
Suggested primer 2:CCCATGACGACCCATGTTGA