Insertion junction: CLIP2.037238_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037238
Chromosome:chromosome 2
Location:6164784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119900 PCP1,CEP6 (1 of 1) PTHR12411//PTHR12411:SF332 - CYSTEINE PROTEASE FAMILY C1-RELATED // SUBFAMILY NOT NAMED; Cysteine endopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTTCCAGTTCTTTGGCAGCTCGTGCTCCTTCTTCAGCGGCGCCGGG
Internal bar code:TCTATTCTGGATGATATTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCAAACCGACCATCCAT
Suggested primer 2:ATGTACCCGAACACGTCCAC