Insertion junction: CLIP2.037238_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037238
Chromosome:chromosome 2
Location:6164790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119900 PCP1,CEP6 (1 of 1) PTHR12411//PTHR12411:SF332 - CYSTEINE PROTEASE FAMILY C1-RELATED // SUBFAMILY NOT NAMED; Cysteine endopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGTGCGCGCCTATGTGTCATGGAAGCATACAGAATTGCGCGCTGGG
Internal bar code:TCTATTCTGGATGATATTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1464
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACCCGAACACGTCCAC
Suggested primer 2:ATGCCAAACCGACCATCCAT