Insertion junction: CLIP2.037246_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037246
Chromosome:chromosome 7
Location:2436334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329050 NCD7,AOC5 Cationic amino acid transporter; (1 of 2) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGCGCGGGTGGCGAGTGCCGGAAGTAAGGCGCAGCGATCAACGCAAA
Internal bar code:CGAATTGTAGGTTAGGTGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5685
LEAP-Seq percent confirming:99.0291
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATGCTGCCTCGTGTAT
Suggested primer 2:GCGTCGATTTCGGAGTTTCG