Insertion junction: CLIP2.037261_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.037261
Chromosome:chromosome 9
Location:5411857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408400 TPT12,TPT13 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC; Triose phosphate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCCATGATGCTGGACCGCCTGGTGTTCCCCGAGAATAGCGGCCGTGC
Internal bar code:CAAAGGTCAGTTCATTGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2399
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACTGCTGCTCCTTTCC
Suggested primer 2:ATTGACTGCAGCTGACGTCA