Insertion junction: CLIP2.037265_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037265
Chromosome:chromosome 5
Location:1974622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATTGCCAGGGCAAGCAAGACTGCGTGGAATTAGTACATACCACCCCA
Internal bar code:ATGCTTCAGTTCTCATTAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGGGGGAGGATCAATGA
Suggested primer 2:CGAACAGCAGGTCACTCCTT