Insertion junction: CLIP2.037265_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.037265
Chromosome:chromosome 5
Location:1974627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCACGTTATGGGTAGTTGGCCTTAAACAGCACTGTAGTAGCACTGTA
Internal bar code:ATGCTTCAGTTCTCATTAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1072
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACAGCAGGTCACTCCTT
Suggested primer 2:ACTCGGGGGAGGATCAATGA