Insertion junction: CLIP2.037281_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037281
Chromosome:chromosome 9
Location:5560350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409426 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGATGCTGCTGGTGCGTCTTGCCGGACTGCCGGCCGCCCATGCTATGG
Internal bar code:TTTCTGCTTAGCGGGGTCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGAGTGTGGTGATGA
Suggested primer 2:TCGACACAGTCTTGGTTCCG