Insertion junction: CLIP2.037282_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037282
Chromosome:chromosome 11
Location:3756043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479200 (1 of 5) PF00995 - Sec1 family (Sec1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGGCAATTCAACGACCTGTGCTCGAATTAGCCGAAAACTTGCAGGGC
Internal bar code:TTATAAGAACGGATCCTAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCAAAAGCTGTGTGGTG
Suggested primer 2:GTGCAAAACTTCGTGGGACC