Insertion junction: CLIP2.037288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037288
Chromosome:chromosome 5
Location:984266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247100 COPT1,COTH1 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACCGCGACCCAGCCATCACGCCGTTCTCGGGAACCCCTCGTGTCGT
Internal bar code:GTCATAACAGTATGGCGTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2927
LEAP-Seq percent confirming:93.0556
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGACGCACGTTTCCTGT
Suggested primer 2:GTCTCCTGCTGGAACCCTTC