Insertion junction: CLIP2.037290_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037290
Chromosome:chromosome 11
Location:3266000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801320 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGAGGACTGTGATCACTGCTTTGATTCCAGAATCCAGGTTCAACAC
Internal bar code:ATCTGTTCATGTAAGTGCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AACAATGCCTGTGTGTGTGC
Suggested primer 2:AAACCAACGAAAACGAGCGG