Insertion junction: CLIP2.037291_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037291
Chromosome:chromosome 4
Location:692995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217953 (1 of 2) PTHR15241:SF0 - TRANSFORMER-2 SEX-DETERMINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGTTCCACCTTTCGAAACGACGGTGGAGCCAGCGAAGCGTCGGCGC
Internal bar code:GGGCCAAGGGGGCGACGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGTGGGCATTTTTGAA
Suggested primer 2:CGCCAGCTCACTTGACAAAC